Publications
Journal Article (896)
1.
Journal Article
Ultra-high-density Neuropixels probes improve detection and identification in neuronal recordings. Neuron 113 (2025)
2.
Journal Article
From neurons to novelty: Circuit mechanisms shaping courtship evolution. Current Opinion in Neurology 95, 103137 (2025)
3.
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An integrated transcriptomic and proteomic map of the mouse hippocampus at synaptic resolution. Nature Communications 16, 7942 (2025)
4.
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Cell type-specific in vivo proteomes with a multicopy mutant methionyl tRNA synthetase mouse line. LabAnimal (2025)
5.
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Neuronal processes contain the essential components for the late steps of ribosome biogenesis. Proceedings of the National Academy of Sciences of the United States of America 122 (31), e2502424122 (2025)
6.
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A computational pipeline to track chromatophores and analyze their dynamics. eLife 14, RP106509 (2025)
7.
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Computational modeling of ketamine-induced changes in gamma-band oscillations: The contribution of parvalbumin and somatostatin interneurons. PLOS Computational Biology 21 (6), e1013118 (2025)
8.
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Ten simple rules for queer data collection and analysis by STEM researchers. PLOS Computational Biology 21 (5), e1013091 (2025)
9.
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The Mind-Matter Dichotomy: A Persistent Challenge for Neuroscientific and Philosophical Theories. European Journal of Neuroscience 61 (10), e70143 (2025)
10.
Journal Article
Full-Length Cryptochrome 1 in the Outer Segments of the Retinal Blue Cone Photoreceptors in Humans and Great Apes Suggests a Role Beyond Transcriptional Repression. Faseb Journal 39 (8), e70523 (2025)
11.
Journal Article
Dendritic growth and synaptic organization from activity-independent cues and local activity-dependent plasticity. eLife 12, RP87527 (2025)
12.
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Distinct retinal ganglion cell types in strictly subterranean, naturally microphthalmic mammals. Proc. R. Soc. B 292 (2038), 20242586 (2025)
13.
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MS SIEVE–Pushing the Limits for Biomolecular Mass Spectrometry. J Am Soc Mass Spectrom 36 (1), pp. 91 - 99 (2024)
14.
Journal Article
Vascular FLRT2 regulates venous-mediated angiogenic expansion and CNS barriergenesis. Nat. Commun. 15 (1), 10372 (2024)
15.
Journal Article
The bearded dragon Pogona vitticeps. Nat. Methods 21, pp. 1964 - 1966 (2024)
16.
Journal Article
Central pattern generator control of a vertebrate ultradian sleep rhythm. Nature (2024)
17.
Journal Article
Integrated multi-omics analysis of PBX1 in mouse adult neural stem- and progenitor cells identifies a transcriptional module that functionally links PBX1 to TCF3/4. Nucleic Acids Res., gkae864 (2024)
18.
Journal Article
Tonically active GABAergic neurons in the dorsal periaqueductal gray control instinctive escape in mice. Curr. Biol. 34 (13), pp. 3031 - 3039.e7 (2024)
19.
Journal Article
Synapse-type-specific competitive Hebbian learning forms functional recurrent networks. Proc. Natl. Acad. Sci. U. S. A. 121 (25), e2305326121 (2024)
20.
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RoboEM: automated 3D flight tracing for synaptic-resolution connectomics. Nat Methods 21, pp. 908 - 913 (2024)
21.
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Top-down modulation in canonical cortical circuits with short-term plasticity. PNAS 121 (16), 2311040121 (2024)
22.
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Rigorous science demands support of transgender scientists. Cell 187 (6), pp. 1327 - 1334 (2024)
23.
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Dynamic fading memory and expectancy effects in the monkey primary visual cortex. PNAS 121 (8), 2314855121 (2024)
24.
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Guiding axon regeneration: Instructions from blood vessels. Neuron 112 (2), pp. 175 - 177 (2024)
25.
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Mysterious ultraslow and ordered activity observed in the cortex. Nature 625, pp. 244 - 245 (2024)
26.
Journal Article
VAP spatially stabilizes dendritic mitochondria to locally support synaptic plasticity. Nat. Commun. 15 (205) (2024)
27.
Journal Article
Minute-scale oscillatory sequences in medial entorhinal cortex. Nature (2023)
28.
Journal Article
The proteomic landscape of synaptic diversity across brain regions and cell types. Cell 186 (24), pp. 5411 - 5427.e23 (2023)
29.
Journal Article
Joint encoding of stimulus and decision in monkey primary visual cortex. Cereb Cortex, bhad420 (2023)
30.
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STED microscopy reveals dendrite-specificity of spines in turtle cortex. Prog Neurobiol 231, 102541 (2023)
31.
Journal Article
Spectral and phase-coherence correlates of impaired auditory mismatch negativity (MMN) in schizophrenia: A MEG study. Schizophrenia Research 261, pp. 60 - 71 (2023)
32.
Journal Article
Detection of Known and Novel Small Proteins in Pseudomonas stutzeri Using a Combination of Bottom-Up and Digest-Free Proteomics and Proteogenomics. Anal. Chem. (2023)
33.
Journal Article
A Blue Light and Two-Photon Activatable Rhodamine Fluorophore. Chemistry 29 (38), e202300997 (2023)
34.
Journal Article
The dynamics of pattern matching in camouflaging cuttlefish. Nature (2023)
35.
Journal Article
Multifaceted luminance gain control beyond photoreceptors in Drosophila. Curr. Biol. 33 (13), pp. 2632 - 2645.e6 (2023)
36.
Journal Article
The Rab5 effector FERRY links early endosomes with mRNA localization. Mol Cell. 83 (11), pp. 1839 - 1855.e13 (2023)
37.
Journal Article
An abundance of free regulatory (19 S) proteasome particles regulates neuronal synapses. Science 380 (6647) (2023)
38.
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High-contrast en bloc staining of mouse whole-brain and human brain samples for EM-based connectomics. Nat. Methods (2023)
39.
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Interhemispheric competition during sleep. Nature (2023)
40.
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Single spikes drive sequential propagation and routing of activity in a cortical network. eLife 12, e79928 (2023)
41.
Journal Article
Dynamic signatures of the Eureka effect: an EEG study. Cerebral Cortex 33 (13), pp. 8679 - 8692 (2023)
42.
Journal Article
Inhibitory top-down projections from zona incerta mediate neocortical memory. Neuron (2023)
43.
Journal Article
A cortico-collicular circuit for accurate orientation to shelter during escape. Nature, pp. 111 - 119 (2023)
44.
Journal Article
Unbiased choice of global clustering parameters for single-molecule localization microscopy. Sci. Rep. 12, 22561 (2022)
45.
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Protocol for making an animal model of “blindsight” in macaque monkeys. STAR Protoc 4 (1), 101960 (2022)
46.
Journal Article
Stability and learning in excitatory synapses by nonlinear inhibitory plasticity. PLoS Computational Biology 18 (12), e1010682 (2022)
47.
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Logistics of neuronal protein turnover: Numbers and mechanisms. Mol Cell Neurosci 123, 103793 (2022)
48.
Journal Article
Dynamic SILAC to Determine Protein Turnover in Neurons and Glia. Methods Mol. Biol. 2603, pp. 1 - 17 (2022)
49.
Journal Article
RNA probes for visualization of sarcin/ricin loop depurination without background fluorescence. Chem. Asian J., e20220107 (2022)
50.
Journal Article
Connectomic analysis of thalamus-driven disinhibition in cortical layer 4. Cell Reports 41 (2), 111476 (2022)
51.
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Molecular diversity and evolution of neuron types in the amniote brain. Science 377 (6610) (2022)
52.
Journal Article
A circuit mechanism for independent modulation of excitatory and inhibitory firing rates after sensory deprivation. PNAS 119 (32), e2116895119 (2022)
53.
Journal Article
Connectomic comparison of mouse and human cortex. Science 377 (6602), eabo0924 (2022)
54.
Journal Article
Cell-type Specific Protein Purification and Identification from Complex Tissues using a Mutant Methionine tRNA Synthetase Mouse Line. J. Vis. Exp. 182 (2022)
55.
Journal Article
Immune competence and spleen size scale with colony status in the naked mole-rat. Open Biol 12 (4), 210292 (2022)
56.
Journal Article
Microbial Rhodopsin Optogenetic Tools: Application for Analyses of Synaptic Transmission and of Neuronal Network Activity in Behavior. Methods Mol. Biol. 2468, pp. 89 - 115 (2022)
57.
Journal Article
Oxytocin receptors influence the development and maintenance of social behavior in zebrafish (Danio rerio). Sci. Rep. 12, 4322 (2022)
58.
Journal Article
Co-translational assembly orchestrates competing biogenesis pathways. Nat. Commun. 13 (1224) (2022)
59.
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Evidence From Imaging Resilience Genetics for a Protective Mechanism Against Schizophrenia in the Ventral Visual Pathway. Schizophr. Bull. 48 (3), pp. 551 - 562 (2022)
60.
Journal Article
The neuropeptide Pth2 modulates social behavior and anxiety in zebrafish. iScience 25 (3), 103868 (2022)
61.
Journal Article
Subcellular RNA-seq for the Analysis of the Dendritic and Somatic Transcriptomes of Single Neurons. Bio Protocol 12 (1), e4278 (2022)
62.
Journal Article
Emergence of synaptic organization and computation in dendrites. Neuroforum (2021)
63.
Journal Article
Quantifying phosphorylation dynamics in primary neuronal cultures using LC-MS/MS. STAR Protocols 3 (1), 101063 (2021)
64.
Journal Article
Flexible inhibitory control of visually evoked defensive behavior by the ventral lateral geniculate nucleus. Neuron 109 (23), pp. 3810 - 3822 (2021)
65.
Journal Article
The orbitofrontal cortex maps future navigational goals. Nature 599, pp. 449 - 452 (2021)
66.
Journal Article
The translatome of neuronal cell bodies, dendrites,and axons. Proc Natl Acad Sci U S A 118 (43), e2113929118 (2021)
67.
Journal Article
Visual exposure enhances stimulus encoding and persistence in primary cortex. PNAS 118 (43), e2105276118 (2021)
68.
Journal Article
Neuronal ribosomes exhibit dynamic and context-dependent exchange of ribosomal proteins. Nat. Commun. 12, 6127 (2021)
69.
Journal Article
The generation of cortical novelty responses through inhibitory plasticity. eLife 10, e65309 (2021)
70.
Journal Article
Correction of amygdalar dysfunction in a rat model of fragile X syndrome. Cell Rep. 37 (2), 109805 (2021)
71.
Journal Article
The prevalence and specificity of local protein synthesis during neuronal synaptic plasticity. Sci. Adv. 7 (38), eabj0790 (2021)
72.
Journal Article
The integrated stress response contributes to tRNA synthetase-associated peripheral neuropathy. Science 373 (6559), pp. 1156 - 1161 (2021)
73.
Journal Article
Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling. Cell Rep. 36 (8), 109583 (2021)
74.
Journal Article
Emergence of local and global synaptic organization on cortical dendrites. Nat. Commun. 12, 4005 (2021)
75.
Journal Article
Cellular connectomes as arbiters of local circuit models in the cerebral cortex. Nature Communications 12, 2785 (2021)
76.
Journal Article
Cortical gamma-band resonance preferentially transmits coherent input. Cell Reports 35 (5), 109083 (2021)
77.
Journal Article
Perceptual Gains and Losses in Synesthesia and Schizophrenia. Schizophr. Bull. 47 (3), pp. 722 - 730 (2021)
78.
Journal Article
Efficient population coding depends on stimulus convergence and source of noise. PLoS Computational Biology 17 (4), e1008897 (2021)
79.
Journal Article
Differential regulation of local mRNA dynamics and translation following long-term potentiation and depression. Proceedings of the National Academy of Sciences (PNAS) 118 (13) (2021)
80.
Journal Article
Adaptation of spontaneous activity in the developing visual cortex. eLife (10), e61619 (2021)
81.
Journal Article
Towards readable code in neuroscience. Nature Reviews Neuroscience 22, pp. 257 - 258 (2021)
82.
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Cultural transmission of vocal dialect in the naked mole-rat. Science 371 (6528), pp. 503 - 507 (2021)
83.
Journal Article
Oxytocin Shapes Spontaneous Activity Patterns in the Developing Visual Cortex by Activating Somatostatin Interneurons. Curr Biol 31 (2), pp. 322 - 333 e5 (2021)
84.
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Subcellular sequencing of single neurons reveals the dendritic transcriptome of GABAergic interneurons. eLife 10, e63092 (2021)
85.
Journal Article
TMT-Opsins differentially modulate medaka brain function in a context-dependent manner. PLoS Biol. 19 (1), e3001012 (2021)
86.
Journal Article
Photo-tethered molecular beacons for superior light-induction. Chem Commun (Camb) (2020)
87.
Journal Article
Functional, molecular and morphological heterogeneity of superficial interneurons in the larval zebrafish tectum. The Journal of Comparative Neurology 529 (9), pp. 2159 - 2175 (2020)
88.
Journal Article
The neuropeptide Pth2 dynamically senses others via mechanosensation. Nature 588 (7839), pp. 653 - 657 (2020)
89.
Journal Article
How Repair-or-Dispose Decisions Under Stress Can Initiate Disease Progression. iScience 23 (11), 101701 (2020)
90.
Journal Article
Statistical Laws of Protein Motion in Neuronal Dendritic Trees. Cell Rep 33 (7), p. 108391 (2020)
91.
Journal Article
Statistical Laws of Protein Motion in Neuronal Dendritic Trees. Cell Rep. 33 (7), 108391 (2020)
92.
Journal Article
Stimulus-specific plasticity of macaque V1 spike rates and gamma. bioRxiv (2020)
93.
Journal Article
A thalamocortical top-down circuit for associative memory. Science 370 (6518), pp. 844 - 848 (2020)
94.
Journal Article
Entorhinal-retrosplenial circuits for allocentric-egocentric transformation of boundary coding. eLife 2020 (9), e59816 (2020)
95.
Journal Article
Homeostatic mechanisms regulate distinct aspects of cortical circuit dynamics. Proceedings of the National Academy of Sciences of the United States of America 117 (39), pp. 24514 - 24525 (2020)
96.
Journal Article
How mRNA localization and protein synthesis sites influence dendritic protein distribution and dynamics. Neuron 103 (6), pp. 1109 - 1122 (2020)
97.
Journal Article
Inhibitory plasticity in layer 1 – dynamic gatekeeper of neocortical associations. Curr. Opin.Neurobiol. 67 (April 2021), pp. 26 - 33 (2020)
98.
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Predictability in natural images determines V1 firing rates and synchronization: A deep neural network approach. bioRxiv (2020)
99.
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On the value of model diversity in neuroscience. Nature Reviews Neuroscience 21 (8), pp. 395 - 396 (2020)