Publications
Journal Article (47)
1.
Journal Article
21, pp. 908 - 913 (2024)
RoboEM: automated 3D flight tracing for synaptic-resolution connectomics. Nat Methods 2.
Journal Article
High-contrast en bloc staining of mouse whole-brain and human brain samples for EM-based connectomics. Nat. Methods (2023)
3.
Journal Article
41 (2), 111476 (2022)
Connectomic analysis of thalamus-driven disinhibition in cortical layer 4. Cell Reports 4.
Journal Article
377 (6602), eabo0924 (2022)
Connectomic comparison of mouse and human cortex. Science 5.
Journal Article
12, 2785 (2021)
Cellular connectomes as arbiters of local circuit models in the cerebral cortex. Nature Communications 6.
Journal Article
9, e46876 (2020)
Cell-type specific innervation of cortical pyramidal cells at their apical dendrites. eLife 7.
Journal Article
182 (6), pp. 1372 - 1376 (2020)
The Mind of a Mouse. Cell 8.
Journal Article
371 (6528) (2020)
Postnatal connectomic development of inhibition in mouse barrel cortex. Science 9.
Journal Article
A community-based transcriptomics classification and nomenclature of neocortical cell types. Nat Neurosci (2020)
10.
Journal Article
Big data in nanoscale connectomicx, and the greed for training labels. Current Opinion in Neurobiology (55), pp. 180 - 187 (2019)
11.
Journal Article
366 (6469) (2019)
Dense connectomic reconstruction in layer 4 of the somatosensory cortex. Science 12.
Journal Article
14 (7), e38976 (2018)
FluoEM, virtual labeling of axons in three-dimensional electron microscopy data for long-range connectomics. eLife 13.
Journal Article
Detecting Synapse Location and Connectivity by Signed Proximity Estimation and Pruning with Deep Nets. arXiv preprint arXiv:1807.02739 (2018)
14.
Journal Article
2017 (6), e26414 (2017)
SynEM, automated synapse detection for connectomics. eLife 15.
Journal Article
14 (7), pp. 691 - 694 (2017)
webKnossos: efficient online 3D data annotation for connectomics. Nat Methods 16.
Journal Article
549 (7673), pp. 469 - 475 (2017)
Axonal synapse sorting in medial entorhinal cortex. Nature 17.
Journal Article
34 (3), pp. 270 - 275 (2016)
Voices of biotech. Nat Biotechnol 18.
Journal Article
87 (6), pp. 1193 - 1206 (2015)
SegEM: Efficient Image Analysis for High-Resolution Connectomics. Neuron 19.
Journal Article
18 (8), pp. 1067 - 1076 (2015)
Common circuit design in fly and mammalian motion vision. Nat Neurosci 20.
Journal Article
86 (1), pp. 25 - 28 (2015)
The mutual inspirations of machine learning and neuroscience. Neuron 21.
Journal Article
25 (11), pp. 4415 - 4429 (2015)
Synaptic Conductance Estimates of the Connection Between Local Inhibitor Interneurons and Pyramidal Neurons in Layer 2/3 of a Cortical Column. Cereb Cortex 22.
Journal Article
6, 7923 (2015)
Large-volume en-bloc staining for electron microscopy-based connectomics. Nat Commun 23.
Journal Article
25 (3), pp. 713 - 725 (2015)
A barrel-related interneuron in layer 4 of rat somatosensory cortex with a high intrabarrel connectivity. Cerebral Cortex 24.
Journal Article
10 (6), pp. 501 - 7 (2013)
Cellular-resolution connectomics: challenges of dense neural circuit reconstruction. Nat Methods 25.
Journal Article
500 (7461), pp. 168 - 74 (2013)
Connectomic reconstruction of the inner plexiform layer in the mouse retina. Nature 26.
Journal Article
8 (12), e1002837 (2012)
3D reconstruction and standardization of the rat vibrissal cortex for precise registration of single neuron morphology. PLoS Comput Biol 27.
Journal Article
16 (4), pp. 796 - 805 (2012)
3D segmentation of SBFSEM images of neuropil by a graphical model over supervoxel boundaries. Med Image Anal 28.
Journal Article
13 (5), pp. 351 - 8 (2012)
Structural neurobiology: missing link to a mechanistic understanding of neural computation. Nat Rev Neurosci 29.
Journal Article
22 (1), pp. 162 - 9 (2012)
Computational methods and challenges for large-scale circuit mapping. Curr Opin Neurobiol 30.
Journal Article
22 (10), pp. 2375 - 91 (2012)
Cell type-specific three-dimensional structure of thalamocortical circuits in a column of rat vibrissal cortex. Cereb Cortex 31.
Journal Article
471 (7337), pp. 183 - 8 (2011)
Wiring specificity in the direction-selectivity circuit of the retina. Nature 32.
Journal Article
14 (8), pp. 1081 - 8 (2011)
High-accuracy neurite reconstruction for high-throughput neuroanatomy. Nat Neurosci 33.
Journal Article
31 (45), pp. 16125 - 38 (2011)
Large-scale automated histology in the pursuit of connectomes. J Neurosci 34.
Journal Article
108 (40), pp. 16807 - 12 (2011)
Inhibitory interneurons in a cortical column form hot zones of inhibition in layers 2 and 5A. Proc Natl Acad Sci U S A 35.
Journal Article
20 (10), pp. 2287 - 303 (2010)
Cell type-specific thalamic innervation in a column of rat vibrissal cortex. Cereb Cortex 36.
Journal Article
20 (10), pp. 2277 - 86 (2010)
Number and laminar distribution of neurons in a thalamocortical projection column of rat vibrissal cortex. Cereb Cortex 37.
Journal Article
22 (2), pp. 511 - 38 (2010)
Convolutional networks can learn to generate affinity graphs for image segmentation. Neural Comput 38.
Journal Article
19 (4), pp. 951 - 62 (2009)
L2/3 interneuron groups defined by multiparameter analysis of axonal projection, dendritic geometry, and electrical excitability. Cereb Cortex 39.
Journal Article
19 (4), pp. 938 - 50 (2009)
The relation between dendritic geometry, electrical excitability, and axonal projections of L2/3 interneurons in rat barrel cortex. Cereb Cortex 40.
Journal Article
19 (4), pp. 926 - 37 (2009)
Neuronal correlates of local, lateral, and translaminar inhibition with reference to cortical columns. Cereb Cortex 41.
Journal Article
18 (2), pp. 397 - 406 (2008)
Monosynaptic connections between pairs of L5A pyramidal neurons in columns of juvenile rat somatosensory cortex. Cereb Cortex 42.
Journal Article
18 (6), pp. 633 - 41 (2008)
3D structural imaging of the brain with photons and electrons. Curr Opin Neurobiol 43.
Journal Article
28 (33), pp. 8273 - 84 (2008)
Efficient recruitment of layer 2/3 interneurons by layer 4 input in single columns of rat somatosensory cortex. J Neurosci 44.
Journal Article
9 (7), pp. 557 - 68 (2008)
Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex. Nat Rev Neurosci 45.
Journal Article
55 (2), pp. 193 - 203 (2007)
Reconstruction of an average cortical column in silico. Brain Res Rev 46.
Journal Article
579 (Pt 3), pp. 737 - 52 (2007)
Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. J Physiol 47.
Journal Article
84 (6), pp. 3508 - 28 (2003)
Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated K+ channels. Biophys J Book Chapter (2)
48.
Book Chapter
Dendritic connectomics. In: Dendrites (eds. Stuart, Spruston, Häusser), 3rd ed. Ed., pp. 623 - 638. Oxford University Press (2016)
49.
Book Chapter
Axons Predict Neuronal Connectivity Within and Between Cortical Columns and Serve as Primary Classifiers of Interneurons in a Cortical Column. In: New Aspects of Axonal Structure and Function, 8, pp. 141 - 155 (Eds. Feldmeyer, D.; Lubke, J.). Springer, New York Dordrecht Heidelberg London (2010)